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» Spotting Structure in Complex Time Dependent Flow
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HYBRID
2000
Springer
15 years 1 months ago
Modular Specification of Hybrid Systems in CHARON
Abstract. We propose a language, called Charon, for modular specification of interacting hybrid systems. For hierarchical description of the system architecture, Charon supports bu...
Rajeev Alur, Radu Grosu, Yerang Hur, Vijay Kumar, ...
CIBCB
2007
IEEE
15 years 4 months ago
Modeling protein-DNA binding time in Stochastic Discrete Event Simulation of Biological Processes
Abstract— This paper presents a parametric model to estimate the DNA-protein binding time using the DNA and protein structures and details of the binding site. To understand the ...
Preetam Ghosh, Samik Ghosh, Kalyan Basu, Sajal K. ...
COMPGEOM
1994
ACM
15 years 1 months ago
Query-Sensitive Ray Shooting
Ray (segment) shooting is the problem of determining the first intersection between a ray (directed line segment) and a collection of polygonal or polyhedral obstacles. In order t...
Joseph S. B. Mitchell, David M. Mount, Subhash Sur...
KDD
2007
ACM
227views Data Mining» more  KDD 2007»
15 years 10 months ago
Fast best-effort pattern matching in large attributed graphs
We focus on large graphs where nodes have attributes, such as a social network where the nodes are labelled with each person's job title. In such a setting, we want to find s...
Hanghang Tong, Christos Faloutsos, Brian Gallagher...
RECOMB
2006
Springer
15 years 10 months ago
A Parameterized Algorithm for Protein Structure Alignment
This paper proposes a parameterized algorithm for aligning two protein structures, in the case where one protein structure is represented by a contact map graph and the other by a ...
Jinbo Xu, Feng Jiao, Bonnie Berger