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CIBCB
2006
IEEE
15 years 3 months ago
A Stochastic model to estimate the time taken for Protein-Ligand Docking
Abstract— Quantum mechanics and molecular dynamic simulation provide important insights into structural configurations and molecular interaction data today. To extend this atomi...
Preetam Ghosh, Samik Ghosh, Kalyan Basu, Sajal K. ...
DAGSTUHL
2006
14 years 11 months ago
Modeling and Simulating Biological Processes with Stochastic Multiset Rewriting
ed Abstract Membrane systems are models of computation inspired by the structure and the function of biological cells. The model was introduced in 1998 by Gh. Paun and since then m...
Matteo Cavaliere, Sean Sedwards
BIOADIT
2004
Springer
15 years 2 months ago
Dynamic Self-Assembly and Computation: From Biological to Information Systems
We present two ways in which dynamic self-assembly can be used to perform computation, via stochastic protein networks and self-assembling software. We describe our protein-emulati...
Ann M. Bouchard, Gordon C. Osbourn
WSC
1998
14 years 10 months ago
Informational Macrodynamics: System Modelling and Simulation Methodologies
Informational Macrodynamics (IMD) presents a unified informational systemic approach with common information language for modeling, analysis and optimization of a variety of inter...
Vladimir S. Lerner
ENTCS
2006
155views more  ENTCS 2006»
14 years 9 months ago
Biomolecular Agents as Multi-behavioural Concurrent Objects
In recent years, there has been increasing interest in computational models of biological systems based on various calculi of communicating processes, such as the stochastic pi-ca...
Denys Duchier, Céline Kuttler