263 search results - page 47 / 53 » Stochastic pairwise alignments |
BMCBI
2005
14 years 9 months ago
2005
Background: Probabilistic models for sequence comparison (such as hidden Markov models and pair hidden Markov models for proteins and mRNAs, or their context-free grammar counterp...
CVPR
2008
IEEE
15 years 11 months ago
2008
IEEE
We consider the problem of finding a matching between two sets of features, given complex relations among them, going beyond pairwise. Each feature set is modeled by a hypergraph ...
102
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RECOMB
2009
Springer
15 years 4 months ago
2009
Springer
This paper presents a new approach to site-directed recombination, swapping combinations of selected discontiguous fragments from a source protein in place of corresponding fragmen...
107
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NIPS
2004
14 years 11 months ago
2004
We show how to build hierarchical, reduced-rank representation for large stochastic matrices and use this representation to design an efficient algorithm for computing the largest...
113
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RECOMB
2004
Springer
15 years 10 months ago
2004
Springer
Phylogenetic hidden Markov models (phylo-HMMs) have recently been proposed as a means for addressing a multispecies version of the ab initio gene prediction problem. These models ...