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» Storage and Retrieval of Individual Genomes
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ICDE
2007
IEEE
190views Database» more  ICDE 2007»
15 years 3 months ago
CPS-tree: A Compact Partitioned Suffix Tree for Disk-based Indexing on Large Genome Sequences
Suffix tree is an important data structure for indexing a long sequence (like a genome sequence) or a concatenation of sequences. It finds many applications in practice, especiall...
Swee-Seong Wong, Wing-Kin Sung, Limsoon Wong
OSDI
2000
ACM
15 years 1 months ago
Latency Management in Storage Systems
Storage Latency Estimation Descriptors, or SLEDs, are an API that allow applications to understand and take advantage of the dynamic state of a storage system. By accessing data i...
Rodney Van Meter, Minxi Gao
82
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HICSS
2005
IEEE
145views Biometrics» more  HICSS 2005»
15 years 5 months ago
Towards a Reliable and Efficient Distributed Storage System
This paper presents RDSS, a Resource Area Network (RAN)-based Distributed Storage System, which is designed for high scalability, long-term reliability, and operational efficiency...
Xiaodong Li, Chang Liu
SIGIR
2005
ACM
15 years 5 months ago
Controlling overlap in content-oriented XML retrieval
The direct application of standard ranking techniques to retrieve individual elements from a collection of XML documents often produces a result set in which the top ranks are dom...
Charles L. A. Clarke
SIGMOD
2011
ACM
150views Database» more  SIGMOD 2011»
14 years 2 months ago
WHAM: a high-throughput sequence alignment method
Over the last decade the cost of producing genomic sequences has dropped dramatically due to the current so called “next-gen” sequencing methods. However, these next-gen seque...
Yinan Li, Allison Terrell, Jignesh M. Patel