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» Strand Algebras for DNA Computing
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89
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DNA
2004
Springer
146views Bioinformatics» more  DNA 2004»
15 years 2 months ago
Partial Words for DNA Coding
A very basic problem in all DNA computations is finding a good encoding. Apart from the fact that they must provide a solution, the strands involved should not exhibit any undesir...
Peter Leupold
73
Voted
IJFCS
2007
111views more  IJFCS 2007»
14 years 9 months ago
Involutively Bordered Words
In this paper we study a generalization of the classical notions of bordered and unbordered words, motivated by DNA computing. DNA strands can be viewed as finite strings over th...
Lila Kari, Kalpana Mahalingam
JCC
2011
87views more  JCC 2011»
14 years 4 months ago
NUPACK: Analysis and design of nucleic acid systems
: The Nucleic Acid Package (NUPACK) is a growing software suite for the analysis and design of nucleic acid systems. The NUPACK web server (http://www.nupack.org) currently enables...
Joseph N. Zadeh, Conrad Steenberg, Justin S. Bois,...
DNA
2006
Springer
110views Bioinformatics» more  DNA 2006»
15 years 1 months ago
DNA Hypernetworks for Information Storage and Retrieval
Content-addressability is a fundamental feature of human memory underlying many associative information retrieval tasks. In contrast to location-based memory devices, content-addre...
Byoung-Tak Zhang, Joo-Kyung Kim
JCC
2008
138views more  JCC 2008»
14 years 9 months ago
Circular dichroism enhancement in large DNA aggregates simulated by a generalized oscillator model
Abstract: An increased circular dichroism (CD) signal of large molecular aggregates formed upon DNA condensation was observed a long time ago, and is often referred to as w-CD. The...
Valery Andrushchenko, Petr Bour