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RECOMB
2006
Springer
15 years 10 months ago
RNA Secondary Structure Prediction Via Energy Density Minimization
Abstract. There is a resurgence of interest in RNA secondary structure prediction problem (a.k.a. the RNA folding problem) due to the discovery of many new families of non-coding R...
Can Alkan, Emre Karakoç, Süleyman Cenk...
ICDM
2009
IEEE
125views Data Mining» more  ICDM 2009»
15 years 4 months ago
A Fully Automated Method for Discovering Community Structures in High Dimensional Data
—Identifying modules, or natural communities, in large complex networks is fundamental in many fields, including social sciences, biological sciences and engineering. Recently s...
Jianhua Ruan
BMCBI
2008
103views more  BMCBI 2008»
14 years 10 months ago
Discovering multi-level structures in bio-molecular data through the Bernstein inequality
Background: The unsupervised discovery of structures (i.e. clusterings) underlying data is a central issue in several branches of bioinformatics. Methods based on the concept of s...
Alberto Bertoni, Giorgio Valentini
KAIS
2000
87views more  KAIS 2000»
14 years 9 months ago
An Index Structure for Data Mining and Clustering
Abstract. In this paper we present an index structure, called MetricMap, that takes a set of objects and a distance metric and then maps those objects to a k-dimensional space in s...
Xiong Wang, Jason Tsong-Li Wang, King-Ip Lin, Denn...
CSB
2003
IEEE
110views Bioinformatics» more  CSB 2003»
15 years 3 months ago
Statistical Inference for Well-ordered Structures in Nucleotide Sequences
Distinct, local structures are frequently correlated with functional RNA elements involved in posttranscriptional regulation of gene expression. Discovery of microRNAs (miRNAs) su...
Shu-Yun Le, Jih-H. Chen, Jacob V. Maizel