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» Structural Results For Planar Sets With Many Similar Subsets
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BMCBI
2007
115views more  BMCBI 2007»
14 years 9 months ago
Local comparison of protein structures highlights cases of convergent evolution in analogous functional sites
Background: We performed an exhaustive search for local structural similarities in an ensemble of non-redundant protein functional sites. With the purpose of finding new examples ...
Gabriele Ausiello, Daniele Peluso, Allegra Via, Ma...
COMAD
2009
14 years 10 months ago
Epsilon Equitable Partition: A positional analysis method for large social networks
Positional analysis is considered an important tool in the analysis of social networks. It involves partitioning of the set of actors into subsets such that actors in a subset are...
Kiran Kate, Balaraman Ravindran
BMCBI
2006
108views more  BMCBI 2006»
14 years 9 months ago
Promoter prediction and annotation of microbial genomes based on DNA sequence and structural responses to superhelical stress
Background: In our previous studies, we found that the sites in prokaryotic genomes which are most susceptible to duplex destabilization under the negative superhelical stresses t...
Huiquan Wang, Craig J. Benham
SAT
2007
Springer
184views Hardware» more  SAT 2007»
15 years 3 months ago
Circuit Based Encoding of CNF Formula
In this paper a new circuit sat based encoding of boolean formula is proposed. It makes an original use of the concept of restrictive models introduced by Boufkhad to polynomially ...
Gilles Audemard, Lakhdar Sais
COCO
2008
Springer
129views Algorithms» more  COCO 2008»
14 years 11 months ago
Constraint Logic: A Uniform Framework for Modeling Computation as Games
We introduce a simple game family, called Constraint Logic, where players reverse edges in a directed graph while satisfying vertex in-flow constraints. This game family can be in...
Erik D. Demaine, Robert A. Hearn