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BMCBI
2007
227views more  BMCBI 2007»
15 years 2 months ago
Growing functional modules from a seed protein via integration of protein interaction and gene expression data
Background: Nowadays modern biology aims at unravelling the strands of complex biological structures such as the protein-protein interaction (PPI) networks. A key concept in the o...
Ioannis A. Maraziotis, Konstantina Dimitrakopoulou...
BMCBI
2006
129views more  BMCBI 2006»
15 years 2 months ago
A literature-based similarity metric for biological processes
Background: Recent analyses in systems biology pursue the discovery of functional modules within the cell. Recognition of such modules requires the integrative analysis of genome-...
Monica Chagoyen, Pedro Carmona-Saez, Concha Gil, J...
EMISA
2005
Springer
15 years 7 months ago
Representing Generalization/Specialization in XML Schema
: XML is an effective universal data-interchange format, and XML Schema has become the preeminent mechanism for describing valid XML document structures. Generalization/specializat...
Reema Al-Kamha, David W. Embley, Stephen W. Liddle
ICSM
1998
IEEE
15 years 6 months ago
Detection of Logical Coupling Based on Product Release History
Code-based metrics such as coupling and cohesion are used to measure a system's structural complexity. But dealing with large systems--those consisting of several millions of...
Harald Gall, Karin Hajek, Mehdi Jazayeri
BMCBI
2006
195views more  BMCBI 2006»
15 years 2 months ago
Hubs of knowledge: using the functional link structure in Biozon to mine for biologically significant entities
Background: Existing biological databases support a variety of queries such as keyword or definition search. However, they do not provide any measure of relevance for the instance...
Paul Shafer, Timothy Isganitis, Golan Yona