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RECOMB
2002
Springer
15 years 10 months ago
Discovering local structure in gene expression data: the order-preserving submatrix problem
This paper concerns the discovery of patterns in gene expression matrices, in which each element gives the expression level of a given gene in a given experiment. Most existing me...
Amir Ben-Dor, Benny Chor, Richard M. Karp, Zohar Y...
SODA
2004
ACM
89views Algorithms» more  SODA 2004»
14 years 11 months ago
The number of bit comparisons used by Quicksort: an average-case analysis
The analyses of many algorithms and data structures (such as digital search trees) for searching and sorting are based on the representation of the keys involved as bit strings and...
James Allen Fill, Svante Janson
CSCW
2000
ACM
15 years 2 months ago
Composable collaboration infrastructures based on programming patterns
In general, collaboration infrastructures have supported sharing of an object based on its logical structure. However, current implementations assume an implicit binding between t...
Vassil Roussev, Prasun Dewan, Vibhor V. Jain
IJBC
2006
130views more  IJBC 2006»
14 years 9 months ago
Automatic Generation of Self-Replicating Patterns in Graph Automata
Graph automata define symbol dynamics on graph structures, which has capability of generating structures in addition to state transition. The rules of the graph automata are unifo...
Kohji Tomita, Haruhisa Kurokawa, Satoshi Murata
BIOCOMP
2006
14 years 11 months ago
TALI: Protein Structure Alignment Using Backbone Torsion Angles
- This article introduces a novel protein structure alignment method (named TALI) based on protein backbone torsion angle instead of the more traditional distance matrix. Represent...
Xijiang Miao, Michael Bryson, Homayoun Valafar