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BMCBI
2002
108views more  BMCBI 2002»
14 years 9 months ago
A memory-efficient dynamic programming algorithm for optimal alignment of a sequence to an RNA secondary structure
Background: Covariance models (CMs) are probabilistic models of RNA secondary structure, analogous to profile hidden Markov models of linear sequence. The dynamic programming algo...
Sean R. Eddy
CORR
2008
Springer
114views Education» more  CORR 2008»
14 years 11 months ago
Self-Assembly of Infinite Structures
We review some recent results related to the self-assembly of infinite structures in the Tile Assembly Model. These results include impossibility results, as well as novel tile as...
Matthew J. Patitz, Scott M. Summers
WSCG
2004
139views more  WSCG 2004»
14 years 11 months ago
Methods for Indexing Stripes in Uncoded Structured Light Scanning Systems
This paper presents robust methods for determining the order of a sequence of stripes captured in an uncoded structured light scanning system, i.e. where all the stripes are proje...
Alan Robinson, Lyuba Alboul, Marcos A. Rodrigues
COLING
2002
14 years 9 months ago
Probabilistic Models of Verb-Argument Structure
We evaluate probabilistic models of verb argument structure trained on a corpus of verbs and their syntactic arguments. Models designed to represent patterns of verb alternation b...
Daniel Gildea
BMCBI
2010
182views more  BMCBI 2010»
14 years 10 months ago
Beyond co-localization: inferring spatial interactions between sub-cellular structures from microscopy images
Background: Sub-cellular structures interact in numerous direct and indirect ways in order to fulfill cellular functions. While direct molecular interactions crucially depend on s...
Jo A. Helmuth, Grégory Paul, Ivo F. Sbalzar...