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BMCBI
2007
96views more  BMCBI 2007»
14 years 12 months ago
Protein subcellular localization prediction based on compartment-specific features and structure conservation
Motivation: Protein subcellular localization is crucial for genome annotation, protein function prediction, and drug discovery. However, since determining subcellular localization...
Emily Chia-Yu Su, Hua-Sheng Chiu, Allan Lo, Jenn-K...
BMCBI
2004
133views more  BMCBI 2004»
14 years 11 months ago
Evaluation of several lightweight stochastic context-free grammars for RNA secondary structure prediction
Background: RNA secondary structure prediction methods based on probabilistic modeling can be developed using stochastic context-free grammars (SCFGs). Such methods can readily co...
Robin D. Dowell, Sean R. Eddy
BMCBI
2008
96views more  BMCBI 2008»
14 years 12 months ago
MSDmotif: exploring protein sites and motifs
Background: Protein structures have conserved features
Adel Golovin, Kim Henrick
CPHYSICS
2006
135views more  CPHYSICS 2006»
14 years 11 months ago
USPEX - Evolutionary crystal structure prediction
We approach the problem of computational crystal structure prediction, implementing an evolutionary algorithm--USPEX (Universal Structure Predictor: Evolutionary Xtallography). St...
Colin W. Glass, Artem R. Oganov, Nikolaus Hansen
BMCBI
2006
150views more  BMCBI 2006»
14 years 12 months ago
Predicting protein subcellular locations using hierarchical ensemble of Bayesian classifiers based on Markov chains
Background: The subcellular location of a protein is closely related to its function. It would be worthwhile to develop a method to predict the subcellular location for a given pr...
Alla Bulashevska, Roland Eils