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ICML
2005
IEEE
16 years 2 months ago
Predicting protein folds with structural repeats using a chain graph model
Protein fold recognition is a key step towards inferring the tertiary structures from amino-acid sequences. Complex folds such as those consisting of interacting structural repeat...
Yan Liu, Eric P. Xing, Jaime G. Carbonell
BMCBI
2010
189views more  BMCBI 2010»
15 years 2 months ago
High quality protein sequence alignment by combining structural profile prediction and profile alignment using SABERTOOTH
Background: Protein alignments are an essential tool for many bioinformatics analyses. While sequence alignments are accurate for proteins of high sequence similarity, they become...
Florian Teichert, Jonas Minning, Ugo Bastolla, Mar...
TIP
2011
123views more  TIP 2011»
14 years 9 months ago
Spatial Sparsity-Induced Prediction (SIP) for Images and Video: A Simple Way to Reject Structured Interference
We propose a prediction technique that is geared toward forming successful estimates of a signal based on a correlated anchor signal that is contaminated with complex interference...
Gang Hua, Onur G. Guleryuz
APBC
2004
123views Bioinformatics» more  APBC 2004»
15 years 3 months ago
Empirical Knowledge and Genetic Algorithms for Selection of Amide I Frequencies in Protein Secondary Structure Prediction
Here we investigate an extension of a previously suggested "automatic amide I frequency selection procedure" where we introduce an additional criterion utilizing empiric...
Joachim A. Hering, Peter R. Innocent, Parvez I. Ha...
BIOINFORMATICS
2011
14 years 8 months ago
All-atom knowledge-based potential for RNA structure prediction and assessment
Motivation: Over the recent years, the vision that RNA simply serves as information transfer molecule has dramatically changed. The study of the sequence/structure/function relati...
Emidio Capriotti, Tomás Norambuena, Marc A....