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BMCBI
2006
125views more  BMCBI 2006»
15 years 1 months ago
Automated functional classification of experimental and predicted protein structures
Background: Proteins that are similar in sequence or structure may perform different functions in nature. In such cases, function cannot be inferred from sequence or structural si...
Kai Wang, Ram Samudrala
CVPR
2011
IEEE
14 years 9 months ago
Learning structured prediction models for interactive image labeling
We propose structured models for image labeling that take into account the dependencies among the image labels explicitly. These models are more expressive than independent label ...
Thomas Mensink, Jakob Verbeek, Gabriela Csurka
BMCBI
2007
134views more  BMCBI 2007»
15 years 2 months ago
Efficient pairwise RNA structure prediction using probabilistic alignment constraints in Dynalign
Background: Joint alignment and secondary structure prediction of two RNA sequences can significantly improve the accuracy of the structural predictions. Methods addressing this p...
Arif Ozgun Harmanci, Gaurav Sharma, David H. Mathe...
BMCBI
2006
102views more  BMCBI 2006»
15 years 1 months ago
Protein secondary structure prediction for a single-sequence using hidden semi-Markov models
Background: The accuracy of protein secondary structure prediction has been improving steadily towards the 88% estimated theoretical limit. There are two types of prediction algor...
Zafer Aydin, Yucel Altunbasak, Mark Borodovsky
APBC
2004
166views Bioinformatics» more  APBC 2004»
15 years 3 months ago
THEMATICS is Effective for Active Site Prediction in Comparative Model Structures
THEMATICS (Theoretical Microscopic Titration Curves) is a simple, reliable computational predictor of the active sites of enzymes from structure. Our method, based on well-establi...
Ihsan A. Shehadi, Alper Uzun, Leonel F. Murga, Val...