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» Structured Sparsity in Structured Prediction
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JBCB
2006
60views more  JBCB 2006»
15 years 4 months ago
Efficient Algorithms and Software for Detection of Full-length Ltr Retrotransposons
LTR retrotransposons constitute one of the most abundant classes of repetitive elements in eukaryotic genomes. In this paper, we present a new algorithm for detection of full-leng...
Anantharaman Kalyanaraman, Srinivas Aluru
125
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JCB
2007
83views more  JCB 2007»
15 years 4 months ago
Evolutionary Networks in the Formatted Protein Sequence Space
In our recent work, a new approach to establish sequence relatedness, by walking through the protein sequence space, was introduced. The sequence space is built from 20 amino acid...
Zakharia M. Frenkel, Edward N. Trifonov
141
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NAR
2000
117views more  NAR 2000»
15 years 4 months ago
The tmRNA Website
tmRNA (also known as 10Sa RNA) is so-named for its dual tRNA-like and mRNA-like nature. It is employed in a remarkable trans-translation process to add a Cterminal peptide tag to ...
Kelly P. Williams
EMNLP
2010
15 years 2 months ago
Constraints Based Taxonomic Relation Classification
Determining whether two terms in text have an ancestor relation (e.g. Toyota and car) or a sibling relation (e.g. Toyota and Honda) is an essential component of textual inference ...
Quang Do, Dan Roth
195
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JCST
2010
109views more  JCST 2010»
14 years 11 months ago
The Inverse Classification Problem
In this paper, we examine an emerging variation of the classification problem, which is known as the inverse classification problem. In this problem, we determine the features to b...
Charu C. Aggarwal, Chen Chen, Jiawei Han