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209
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BMCBI
2007
142views more  BMCBI 2007»
15 years 7 months ago
Improving model construction of profile HMMs for remote homology detection through structural alignment
Background: Remote homology detection is a challenging problem in Bioinformatics. Arguably, profile Hidden Markov Models (pHMMs) are one of the most successful approaches in addre...
Juliana S. Bernardes, Alberto M. R. Dávila,...
BMCBI
2006
102views more  BMCBI 2006»
15 years 7 months ago
Protein secondary structure prediction for a single-sequence using hidden semi-Markov models
Background: The accuracy of protein secondary structure prediction has been improving steadily towards the 88% estimated theoretical limit. There are two types of prediction algor...
Zafer Aydin, Yucel Altunbasak, Mark Borodovsky
177
Voted
CDC
2008
IEEE
141views Control Systems» more  CDC 2008»
16 years 1 months ago
Generalized linear dynamic factor models - a structure theory
— In this paper we present a structure theory for generalized linear dynamic factor models (GDFM’s). Emphasis is laid on the so-called zeroless case. GDFM’s provide a way of ...
Brian D. O. Anderson, Manfred Deistler
176
Voted
ECBS
1999
IEEE
93views Hardware» more  ECBS 1999»
15 years 11 months ago
Structured Specification of Model Interpreters
Model interpreters play an essential role in modelintegrated systems: they transform domain-specific models into executable models. The state-ot-the-art of model interpreter writi...
Gabor Karsai
CORR
2008
Springer
89views Education» more  CORR 2008»
15 years 7 months ago
Model Checking Positive Equality-free FO: Boolean Structures and Digraphs of Size Three
We study the model checking problem, for fixed structures A, over positive equality-free first-order logic
Barnaby Martin