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RECOMB
2001
Springer
16 years 2 months ago
Predicting the beta-helix fold from protein sequence data
A method is presented that uses b-strand interactions to predict the parallel right-handed b-helix super-secondary structural motif in protein sequences. A program called BetaWrap...
Phil Bradley, Lenore Cowen, Matthew Menke, Jonatha...
ICASSP
2007
IEEE
15 years 8 months ago
Fast Search of Sequences with Complex Symbol Correlations using Profile Context-Sensitive HMMS and Pre-Screening Filters
Recently, profile context-sensitive HMMs (profile-csHMMs) have been proposed which are very effective in modeling the common patterns and motifs in related symbol sequences. Pro...
Byung-Jun Yoon, P. P. Vaidyanathan
RECOMB
2004
Springer
16 years 2 months ago
Predicting Genetic Regulatory Response Using Classification: Yeast Stress Response
We present a novel classification-based algorithm called GeneClass for learning to predict gene regulatory response. Our approach is motivated by the hypothesis that in simple orga...
Manuel Middendorf, Anshul Kundaje, Chris Wiggins, ...
SDM
2007
SIAM
201views Data Mining» more  SDM 2007»
15 years 3 months ago
Fast Best-Match Shape Searching in Rotation Invariant Metric Spaces
Object recognition and content-based image retrieval systems rely heavily on the accurate and efficient identification of shapes. A fundamental requirement in the shape analysis ...
Dragomir Yankov, Eamonn J. Keogh, Li Wei, Xiaopeng...
TMM
2008
201views more  TMM 2008»
15 years 1 months ago
Fast Best-Match Shape Searching in Rotation-Invariant Metric Spaces
Object recognition and content-based image retrieval systems rely heavily on the accurate and efficient identification of shapes. A fundamental requirement in the shape analysis p...
Dragomir Yankov, Eamonn J. Keogh, Li Wei, Xiaopeng...