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BMCBI
2010
122views more  BMCBI 2010»
14 years 9 months ago
Fast and accurate protein substructure searching with simulated annealing and GPUs
Background: Searching a database of protein structures for matches to a query structure, or occurrences of a structural motif, is an important task in structural biology and bioin...
Alex Stivala, Peter J. Stuckey, Anthony Wirth
ICTAI
1993
IEEE
15 years 1 months ago
MERIT Motifs
MERIT (Multimedia Extensions of Retrieval Interaction Tools)1 provides a user-centered interface to a database covering European research programs, projects, and consortia in the ...
Ulrich Thiel, Martin Kracker, Adelheit Stein
SDM
2009
SIAM
164views Data Mining» more  SDM 2009»
15 years 6 months ago
Exact Discovery of Time Series Motifs.
Time series motifs are pairs of individual time series, or subsequences of a longer time series, which are very similar to each other. As with their discrete analogues in computat...
Abdullah Mueen, Eamonn J. Keogh, M. Brandon Westov...
BMCBI
2008
123views more  BMCBI 2008»
14 years 9 months ago
A tree-based conservation scoring method for short linear motifs in multiple alignments of protein sequences
Background: The structure of many eukaryotic cell regulatory proteins is highly modular. They are assembled from globular domains, segments of natively disordered polypeptides and...
Claudia Chica, Alberto Labarga, Cathryn M. Gould, ...
SDM
2007
SIAM
145views Data Mining» more  SDM 2007»
14 years 11 months ago
Finding Motifs in a Database of Shapes
The problem of efficiently finding images that are similar to a target image has attracted much attention in the image processing community and is rightly considered an informatio...
Xiaopeng Xi, Eamonn J. Keogh, Li Wei, Agenor Mafra...