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BMCBI
2007
173views more  BMCBI 2007»
15 years 5 months ago
Ringo - an R/Bioconductor package for analyzing ChIP-chip readouts
Background: Chromatin immunoprecipitation combined with DNA microarrays (ChIP-chip) is a high-throughput assay for DNA-protein-binding or post-translational chromatin/histone modi...
Joern Toedling, Oleg Sklyar, Tammo Krueger, Jenny ...
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BMCBI
2008
176views more  BMCBI 2008»
15 years 5 months ago
H2r: Identification of evolutionary important residues by means of an entropy based analysis of multiple sequence alignments
Background: A multiple sequence alignment (MSA) generated for a protein can be used to characterise residues by means of a statistical analysis of single columns. In addition to t...
Rainer Merkl, Matthias Zwick
BMCBI
2006
156views more  BMCBI 2006»
15 years 5 months ago
GOFFA: Gene Ontology For Functional Analysis - A FDA Gene Ontology Tool for Analysis of Genomic and Proteomic Data
Background: Gene Ontology (GO) characterizes and categorizes the functions of genes and their products according to biological processes, molecular functions and cellular componen...
Hongmei Sun, Hong Fang, Tao Chen, Roger Perkins, W...
DEBU
2007
142views more  DEBU 2007»
15 years 4 months ago
Multi-lingual Indexing Support for CLIR using Language Modeling
An indexing model is the heart of an Information Retrieval (IR) system. Data structures such as term based inverted indices have proved to be very effective for IR using vector sp...
Prasad Pingali, Vasudeva Varma
PAMI
2006
230views more  PAMI 2006»
15 years 4 months ago
Shape Registration in Implicit Spaces Using Information Theory and Free Form Deformations
We present a novel variational and statistical approach for shape registration. Shapes of interest are implicitly embedded in a higher dimensional space of distance transforms. In...
Xiaolei Huang, Nikos Paragios, Dimitris N. Metaxas