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» Study on Properties of Protein Folding Conformation Network
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CEC
2011
IEEE
14 years 1 months ago
Comparing alternative energy functions for the HP model of protein structure prediction
Abstract—Protein structure prediction is the problem of finding the functional conformation of a protein given only its amino uence. The HP lattice model is an abstract formulat...
Mario Garza-Fabre, Eduardo Rodriguez-Tello, Gregor...
BMCBI
2008
147views more  BMCBI 2008»
15 years 1 months ago
Transmembrane helix prediction using amino acid property features and latent semantic analysis
Background: Prediction of transmembrane (TM) helices by statistical methods suffers from lack of sufficient training data. Current best methods use hundreds or even thousands of f...
Madhavi Ganapathiraju, Narayanas Balakrishnan, Raj...
BMCBI
2010
120views more  BMCBI 2010»
15 years 1 months ago
Examination of the relationship between essential genes in PPI network and hub proteins in reverse nearest neighbor topology
Background: In many protein-protein interaction (PPI) networks, densely connected hub proteins are more likely to be essential proteins. This is referred to as the "centralit...
Kang Ning, Hoong Kee Ng, Sriganesh Srihari, Hon Wa...
BMCBI
2010
101views more  BMCBI 2010»
15 years 1 months ago
Comparative analysis of thermophilic and mesophilic proteins using Protein Energy Networks
Background: Thermophilic proteins sustain themselves and function at higher temperatures. Despite their structural and functional similarities with their mesophilic homologues, th...
M. S. Vijayabaskar, Saraswathi Vishveshwara
ADHOCNOW
2008
Springer
15 years 8 months ago
Distributed Monitoring in Ad Hoc Networks: Conformance and Security Checking
Ad hoc networks are exposed more than traditional networks to security threats due to their mobility and open architecture aspects. In addition, any dysfunction due to badly congu...
Wissam Mallouli, Bachar Wehbi, Ana R. Cavalli