The paper explores the power of two systematic Branch and Bound search algorithms that exploit partition-based heuristics, BBBT (a new algorithm for which the heuristic informatio...
— We present efficient cache-oblivious algorithms for some well-studied string problems in bioinformatics including the longest common subsequence, global pairwise sequence alig...
Rezaul Alam Chowdhury, Hai-son Le, Vijaya Ramachan...
We study the topological simplification of graphs via random embeddings, leading ultimately to a reduction of the Gupta-Newman-Rabinovich-Sinclair (GNRS) L1 embedding conjecture t...
Abstract. In this paper we present a novel approach to the graph isomorphism problem. We combine a direct approach, that tries to find a mapping between the two input graphs using...
Given string T = T[1, . . . , n], the suffix sorting problem is to lexicographically sort the suffixes T[i, . . . , n] for all i. This problem is central to the construction of suf...