We consider the problem of discovering the optimal pair of substring patterns with bounded distance α, from a given set S of strings. We study two kinds of pattern classes, one is...
This paper proposes a parameterized algorithm for aligning two protein structures, in the case where one protein structure is represented by a contact map graph and the other by a ...
Machine scheduling is a critical problem in industries where products are custom-designed. The wide range of products, the lack of previous experiences in manufacturing, and the s...
Juan Carlos Vidal, Manuel Mucientes, Alberto Bugar...
We introduce the notion of conservative edit distance and mapping between two RNA stem-loops. We show that unlike the general edit distance between RNA secondary structures, the co...
The problem of computing a representation of the stabbing lines of a set S of segments in the plane was solved by Edelsbrunner et al. We provide efficient algorithms for the follo...