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» Subsequence Matching on Structured Time Series Data
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TCS
2008
14 years 9 months ago
Algorithms for subsequence combinatorics
A subsequence is obtained from a string by deleting any number of characters; thus in contrast to a substring, a subsequence is not necessarily a contiguous part of the string. Co...
Cees H. Elzinga, Sven Rahmann, Hui Wang
BIOCOMP
2006
14 years 11 months ago
Dynamic Bayesian Network (DBN) with Structure Expectation Maximization (SEM) for Modeling of Gene Network from Time Series Gene
Exploring gene regulatory network is a key topic in molecular biology. In this paper, we present a new dynamic Bayesian network (DBN) framework embedded with structural expectatio...
Yu Zhang, Zhidong Deng, Hongshan Jiang, Peifa Jia
BIBE
2003
IEEE
121views Bioinformatics» more  BIBE 2003»
15 years 2 months ago
Time Series Analysis of Gene Expression and Location Data
We develop a method for integrating time series expression profiles and factor-gene binding data to quantify dynamic aspects of gene regulation. We estimate latencies for transcr...
Chen-Hsiang Yeang, Tommi Jaakkola
ICDM
2009
IEEE
121views Data Mining» more  ICDM 2009»
15 years 4 months ago
Finding Time Series Motifs in Disk-Resident Data
—Time series motifs are sets of very similar subsequences of a long time series. They are of interest in their own right, and are also used as inputs in several higher-level data...
Abdullah Mueen, Eamonn J. Keogh, Nima Bigdely Sham...
IDEAS
2007
IEEE
146views Database» more  IDEAS 2007»
15 years 3 months ago
Approximate Structural Matching over Ordered XML Documents
There is an increasing need for an XML query engine that not only searches for exact matches to a query but also returns “query-like” structures. We have designed and develope...
Nitin Agarwal, Magdiel Galan Oliveras, Yi Chen