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BMCBI
2010
161views more  BMCBI 2010»
14 years 9 months ago
LTC: a novel algorithm to improve the efficiency of contig assembly for physical mapping in complex genomes
Background: Physical maps are the substrate of genome sequencing and map-based cloning and their construction relies on the accurate assembly of BAC clones into large contigs that...
Zeev Frenkel, Etienne Paux, David I. Mester, Cathe...
NAR
2006
120views more  NAR 2006»
14 years 11 months ago
TreeDomViewer: a tool for the visualization of phylogeny and protein domain structure
Phylogenetic analysis and examination of protein domains allow accurate genome annotation and are invaluable to study proteins and protein complex evolution. However, two sequence...
Blaise T. F. Alako, Daphne Rainey, Harm Nijveen, J...
RECOMB
2006
Springer
16 years 2 days ago
Efficient Enumeration of Phylogenetically Informative Substrings
We study the problem of enumerating substrings that are common amongst genomes that share evolutionary descent. For example, one might want to enumerate all identical (therefore co...
Stanislav Angelov, Boulos Harb, Sampath Kannan, Sa...
CEC
2003
IEEE
15 years 3 months ago
Dynamics of gene expression in an artificial genome
Abstract- Complex systems techniques provide a powerful tool to study the emergent properties of networks of interacting genes. In this study we extract models of genetic regulator...
Kai Willadsen, Janet Wiles
ISMIS
1997
Springer
15 years 3 months ago
Knowledge-Based Image Retrieval with Spatial and Temporal Constructs
e about image features can be expressed as a hierarchical structure called a Type Abstraction Hierarchy (TAH). TAHs can be generated automatically by clustering algorithms based on...
Wesley W. Chu, Alfonso F. Cardenas, Ricky K. Taira