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» Suffix trees for very large genomic sequences
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BMCBI
2002
126views more  BMCBI 2002»
14 years 11 months ago
RIO: Analyzing proteomes by automated phylogenomics using resampled inference of orthologs
Background: When analyzing protein sequences using sequence similarity searches, orthologous sequences (that diverged by speciation) are more reliable predictors of a new protein&...
Christian M. Zmasek, Sean R. Eddy
ALIFE
2004
14 years 11 months ago
Using Avida to Test the Effects of Natural Selection on Phylogenetic Reconstruction Methods
Phylogenetic trees group organisms by their ancestral relationships. There are a number of distinct algorithms used to reconstruct these trees from molecular sequence data, but dif...
George I. Hagstrom, Dehua H. Hang, Charles Ofria, ...
AAAI
2008
15 years 26 days ago
Reasoning about Large Taxonomies of Actions
We design a representation based on the situation calculus to facilitate development, maintenance and elaboration of very large taxonomies of actions. This representation leads to...
Yilan Gu, Mikhail Soutchanski
BMCBI
2005
112views more  BMCBI 2005»
14 years 11 months ago
Web services and workflow management for biological resources
Backgorund: The completion of the Human Genome Project has resulted in large quantities of biological data which are proving difficult to manage and integrate effectively. There i...
Paolo Romano 0001, Domenico Marra, Luciano Milanes...
DPC
1996
192views more  DPC 1996»
15 years 1 months ago
Finding Pictures of Objects in Large Collections of Images
Retrieving images from very large collections, using image content as a key, is becoming an important problem. Users prefer to ask for pictures using notions of content that are st...
David A. Forsyth, Jitendra Malik, Thomas K. Leung,...