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» Synthetic biology - putting engineering into biology
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BMCBI
2010
110views more  BMCBI 2010»
14 years 12 months ago
TimeDelay-ARACNE: Reverse engineering of gene networks from time-course data by an information theoretic approach
Background: One of main aims of Molecular Biology is the gain of knowledge about how molecular components interact each other and to understand gene function regulations. Using mi...
Pietro Zoppoli, Sandro Morganella, Michele Ceccare...
BIRTHDAY
2010
Springer
14 years 9 months ago
Some Thoughts on the Semantics of Biocharts
Abstract. This paper combines three topics to which Amir Pnueli contributed significantly: the semantics of languages for concurrency, the semantics of statecharts, and reactive an...
David Harel, Hillel Kugler
ISMB
1994
15 years 1 months ago
A Restriction Mapping Engine Using Constraint Logic Programming
Restrictionmappinggenerallyrequires the applicationof information from various digestions by restriction enzymesto find solution sets. Weuse boththe predicate calculusandconstrain...
Trevor I. Dix, Chut N. Yee
DAC
2007
ACM
16 years 23 days ago
Synthesizing Stochasticity in Biochemical Systems
Randomness is inherent to biochemistry: at each instant, the sequence of reactions that fires is a matter of chance. Some biological systems exploit such randomness, choosing betw...
Brian Fett, Jehoshua Bruck, Marc D. Riedel
BMCBI
2010
134views more  BMCBI 2010»
14 years 12 months ago
ScreenMill: A freely available software suite for growth measurement, analysis and visualization of high-throughput screen data
Background: Many high-throughput genomic experiments, such as Synthetic Genetic Array and yeast two-hybrid, use colony growth on solid media as a screen metric. These experiments ...
John C. Dittmar, Robert J. D. Reid, Rodney Rothste...