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» Systems biology, models, and concurrency
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JCC
2007
69views more  JCC 2007»
14 years 9 months ago
Discrimination of dynamical system models for biological and chemical processes
In technical chemistry, systems biology and biotechnology, the construction of predictive models has become an essential step in process design and product optimization. Accurate ...
Sönke Lorenz, Elmar Diederichs, Regina Telgma...
PDCAT
2004
Springer
15 years 2 months ago
Parallel Computing Platform for the Agent-Based Modeling of Multicellular Biological Systems
Abstract. Agent-based simulation of large multicellular biological systems has become a viable option owing to affordable parallel computers, such as Beowulf-style clusters. We de...
Toh Da-Jun, Francis Tang, Travis Lee, Deepak Sarda...
BMCBI
2007
215views more  BMCBI 2007»
14 years 9 months ago
Learning causal networks from systems biology time course data: an effective model selection procedure for the vector autoregres
Background: Causal networks based on the vector autoregressive (VAR) process are a promising statistical tool for modeling regulatory interactions in a cell. However, learning the...
Rainer Opgen-Rhein, Korbinian Strimmer
EUROCAST
2007
Springer
104views Hardware» more  EUROCAST 2007»
15 years 3 months ago
Entropy-Based Modeling and Simulation of Evolution in Biological Systems
Abstract. We report computer-aided modeling and simulation of evolution in biological systems with living organisms as effect of extremum properties of classical statistical entro...
Stanislaw Sieniutycz
81
Voted
CSB
2005
IEEE
130views Bioinformatics» more  CSB 2005»
15 years 3 months ago
iSimBioSys: An "In Silico" Discrete Event Simulation Framework for Modeling Biological Systems
The genome projects have provided comprehensive information about the basic building blocks of life. The next challenge is to understand how biological functions emerge from compl...
Samik Ghosh, Preetam Ghosh, Kalyan Basu, Sajal K. ...