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» Systems biology, models, and concurrency
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IFM
2004
Springer
185views Formal Methods» more  IFM 2004»
15 years 6 months ago
Object-Oriented Modelling with High-Level Modular Petri Nets
Abstract. In this paper, we address the problem of expressing objectoriented concepts in terms of Petri nets. This is interesting, first, as a possibility of representing concurre...
Cécile Bui Thanh, Hanna Klaudel
CORR
2010
Springer
174views Education» more  CORR 2010»
15 years 1 months ago
Hybrid Numerical Solution of the Chemical Master Equation
We present a numerical approximation technique for the analysis of continuous-time Markov chains that describe networks of biochemical reactions and play an important role in the ...
Thomas A. Henzinger, Maria Mateescu, Linar Mikeev,...
ECAL
1995
Springer
15 years 5 months ago
Contextual Genetic Algorithms: Evolving Developmental Rules
A genetic algorithm scheme with a stochastic genotype/phenotype relation is proposed. The mechanisms responsible for this intermediate level of uncertainty, are inspired by the bio...
Luis Mateus Rocha
EWC
2000
105views more  EWC 2000»
15 years 1 months ago
Design Families and Design Individuals
: This paper discusses design families and design individuals. Phase space is introduced to complement state space. Phase transition as a generic method of generating design famili...
Xiao-Guang Shi, John S. Gero
JCB
2008
90views more  JCB 2008»
15 years 1 months ago
A Simple Model of the Modular Structure of Transcriptional Regulation in Yeast
Resolving the general organizational principles that govern the interactions during transcriptional gene regulation has great relevance for understanding disease progression, biof...
Vladimir Filkov, Nameeta Shah