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» Systems biology, models, and concurrency
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IFM
2004
Springer
175views Formal Methods» more  IFM 2004»
15 years 6 months ago
State/Event-Based Software Model Checking
Abstract. We present a framework for model checking concurrent software systems which incorporates both states and events. Contrary to other state/event approaches, our work also i...
Sagar Chaki, Edmund M. Clarke, Joël Ouaknine,...
IJON
2000
85views more  IJON 2000»
15 years 1 months ago
Hebbian learning and temporary storage in the convergence-zone model of episodic memory
The Convergence-Zone model shows how sparse, random memory patterns can lead to one-shot storage and high capacity in the hippocampal component of the episodic memory system. This...
Michael Howe, Risto Miikkulainen
ASM
2010
ASM
15 years 10 months ago
Lightweight Modeling of Java Virtual Machine Security Constraints
The Java programming language has been widely described as secure by design. Nevertheless, a number of serious security vulnerabilities have been discovered in Java, particularly i...
Mark C. Reynolds
CISIS
2009
IEEE
15 years 8 months ago
A Nonmonotonic Logical Approach for Modelling and Revising Metabolic Networks
—This paper describes a new logic-based approach for representing and reasoning about metabolic networks. First it shows how biological pathways can be elegantly represented in a...
Oliver Ray, Ken E. Whelan, Ross D. King
BIBM
2009
IEEE
183views Bioinformatics» more  BIBM 2009»
15 years 6 months ago
Modeling Protein Interaction Networks with Answer Set Programming
—In this paper we propose the use of answer set programming (ASP) to model protein interaction networks. We argue that this declarative formalism rivals the popular boolean netwo...
Timur Fayruzov, Martine De Cock, Chris Cornelis, D...