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» Systems biology, models, and concurrency
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132
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BIB
2010
129views more  BIB 2010»
15 years 2 months ago
Pathway Tools version 13.0: integrated software for pathway/genome informatics and systems biology
PathwayTools is a production-quality software environment for creating a type of model-organism database called a Pathway/Genome Database (PGDB). A PGDB such as EcoCyc integrates ...
Peter D. Karp, Suzanne M. Paley, Markus Krummenack...
SIAMSC
2008
131views more  SIAMSC 2008»
15 years 1 months ago
Fast Monte Carlo Simulation Methods for Biological Reaction-Diffusion Systems in Solution and on Surfaces
Many important physiological processes operate at time and space scales far beyond those accessible to atom-realistic simulations, and yet discrete stochastic rather than continuum...
Rex A. Kerr, Thomas M. Bartol, Boris Kaminsky, Mar...
78
Voted
DEXAW
2003
IEEE
97views Database» more  DEXAW 2003»
15 years 7 months ago
Concurrent bi-lateral negotiation in agent systems
Bi-lateral negotiations represent an important class of encounter in agent-based systems. To this end, this paper develops and evaluates a heuristic model that enables an agent to...
Thuc Duong Nguyen, Nicholas R. Jennings
130
Voted
FM
2009
Springer
169views Formal Methods» more  FM 2009»
15 years 5 months ago
Model Checking Linearizability via Refinement
Abstract. Linearizability is an important correctness criterion for implementations of concurrent objects. Automatic checking of linearizability is challenging because it requires ...
Yang Liu 0003, Wei Chen, Yanhong A. Liu, Jun Sun 0...
109
Voted
GECCO
2008
Springer
129views Optimization» more  GECCO 2008»
15 years 2 months ago
Searching for liveness property violations in concurrent systems with ACO
Liveness properties in concurrent systems are, informally, those properties that stipulate that something good eventually happens during execution. In order to prove that a given ...
Enrique Alba, J. Francisco Chicano