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» Systems biology, models, and concurrency
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CONCUR
2007
Springer
14 years 13 days ago
Rule-Based Modelling of Cellular Signalling
Abstract. Modelling is becoming a necessity in studying biological signalling pathways, because the combinatorial complexity of such systems rapidly overwhelms intuitive and qualit...
Vincent Danos, Jérôme Feret, Walter F...
EPIA
2003
Springer
13 years 11 months ago
jcc: Integrating Timed Default Concurrent Constraint Programming into Java
Abstract. This paper describes jcc, an integration of the timed default concurrent constraint programming framework [16] (Timed Default cc) into JAVA [7]. jcc is intended for use i...
Vijay A. Saraswat, Radha Jagadeesan, Vineet Gupta
JALC
2006
95views more  JALC 2006»
13 years 6 months ago
On the Decidability of Model-Checking for P Systems
Membrane computing is a branch of molecular computing that aims to develop models and paradigms that are biologically motivated. It identifies an unconventional computing model, n...
Zhe Dang, Oscar H. Ibarra, Cheng Li, Gaoyan Xie
ACSD
2008
IEEE
130views Hardware» more  ACSD 2008»
14 years 23 days ago
BAM: BioAmbient machine
In recent years it has become clear that techniques developed for concurrent programming are in fact very useful for the analysis of complex systems in biology. To some level of i...
Vinod A. Muganthan, Andrew Phillips, Maria Grazia ...
NAR
2006
188views more  NAR 2006»
13 years 6 months ago
BiologicalNetworks: visualization and analysis tool for systems biology
Systemslevelinvestigationofgenomicscaleinformation requires the development of truly integrated databases dealing with heterogeneous data, which can be queried for simple properti...
Michael Baitaluk, Mayya Sedova, Animesh Ray, Amarn...