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» Systems biology, models, and concurrency
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COMPSAC
2006
IEEE
15 years 7 months ago
A Biologically-Inspired Autonomic Architecture for Self-Healing Data Centers
—This paper describes a biologically-inspired network architecture, called SymbioticSphere, which allows large-scale data centers to autonomously adapt to dynamic environmental c...
Paskorn Champrasert, Junichi Suzuki
124
Voted
GECCO
2005
Springer
149views Optimization» more  GECCO 2005»
15 years 7 months ago
There's more to a model than code: understanding and formalizing in silico modeling experience
Mapping biology into computation has both a domain specific aspect – biological theory – and a methodological aspect – model development. Computational modelers have implici...
Janet Wiles, Nicholas Geard, James Watson, Kai Wil...
FOCI
2007
IEEE
15 years 8 months ago
The Immune System in Pieces: Computational Lessons from Degeneracy in the Immune System
— The concept of degeneracy in biology, including the immune system, is well accepted and has been demonstrated to be present at many different levels. We explore this concept fr...
Miguel Mendao, Jonathan Timmis, Paul S. Andrews, M...
125
Voted
BMCBI
2008
149views more  BMCBI 2008»
15 years 1 months ago
Evolution of biological sequences implies an extreme value distribution of type I for both global and local pairwise alignment s
Background: Confidence in pairwise alignments of biological sequences, obtained by various methods such as Blast or Smith-Waterman, is critical for automatic analyses of genomic d...
Olivier Bastien, Eric Maréchal
119
Voted
SIGSOFT
2010
ACM
14 years 11 months ago
Building scalable software systems in the multicore era
Software systems must face two challenges today: growing complexity and increasing parallelism in the underlying computational models. The problem of increased complexity is often...
Hridesh Rajan