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BMCBI
2010
105views more  BMCBI 2010»
15 years 2 months ago
Subdivision of the MDR superfamily of medium-chain dehydrogenases/reductases through iterative hidden Markov model refinement
Background: The Medium-chain Dehydrogenases/Reductases (MDR) form a protein superfamily whose size and complexity defeats traditional means of subclassification; it currently has ...
Joel Hedlund, Hans Jörnvall, Bengt Persson
GECCO
2006
Springer
133views Optimization» more  GECCO 2006»
15 years 5 months ago
String transformation-based Bayesian classification or proteins
We describe a Markov chain Bayesian classification tool, SCS, that can perform data-driven classification of proteins and protein segments. Training data for interesting classific...
Timothy Meekhof, Gary W. Daughdrill, Robert B. Hec...
BMCBI
2002
133views more  BMCBI 2002»
15 years 1 months ago
Identification and characterization of subfamily-specific signatures in a large protein superfamily by a hidden Markov model app
Background: Most profile and motif databases strive to classify protein sequences into a broad spectrum of protein families. The next step of such database studies should include ...
Kevin Truong, Mitsuhiko Ikura
FLAIRS
2004
15 years 3 months ago
Semi-Supervised Sequence Classification with HMMs
Using unlabeled data to help supervised learning has become an increasingly attractive methodology and proven to be effective in many applications. This paper applies semi-supervi...
Shi Zhong
ICCV
2003
IEEE
16 years 3 months ago
Discriminative Random Fields: A Discriminative Framework for Contextual Interaction in Classification
In this work we present Discriminative Random Fields (DRFs), a discriminative framework for the classification of image regions by incorporating neighborhood interactions in the l...
Sanjiv Kumar, Martial Hebert