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WABI
2004
Springer
15 years 3 months ago
Chaining Algorithms for Alignment of Draft Sequence
Abstract. In this paper we propose a chaining method that can align a draft genomic sequence against a finished genome. We introduce the use of an overlap tree to enhance the state...
Mukund Sundararajan, Michael Brudno, Kerrin Small,...
TREC
2004
14 years 11 months ago
TREC Novelty Track at IRIT-SIG
In TREC 2004, IRIT modified important features of the strategy that was developed for TREC 2003. Changes include tuning parameter values, topic expansion and exploitation of sente...
Taoufiq Dkaki, Josiane Mothe
RECOMB
2004
Springer
15 years 10 months ago
Finding anchors for genomic sequence comparison
Ross Lippert, Xiaoyue Zhao, Liliana Florea, Clark ...
BIBE
2007
IEEE
169views Bioinformatics» more  BIBE 2007»
15 years 4 months ago
Combining Semantics, Context, and Statistical Evidence in Genomics Literature Search
—We present an information retrieval model for combining evidence from concept-based semantics, term statistics, and context for improving search precision of genomics literature...
Jay Urbain, Nazli Goharian, Ophir Frieder
BMCBI
2004
94views more  BMCBI 2004»
14 years 9 months ago
Caryoscope: An Open Source Java application for viewing microarray data in a genomic context
Background: Microarray-based comparative genome hybridization experiments generate data that can be mapped onto the genome. These data are interpreted more easily when represented...
Ihab A. B. Awad, Christian A. Rees, Tina Hernandez...