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» Task-Oriented Integrated Use of Biological Web Data Sources
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NLDB
2005
Springer
15 years 5 months ago
Combining Biological Databases and Text Mining to Support New Bioinformatics Applications
Abstract. A large amount of biological knowledge today is only available from full-text research papers. Since neither manual database curators nor users can keep up with the rapid...
René Witte, Christopher J. O. Baker
BMCBI
2008
169views more  BMCBI 2008»
14 years 12 months ago
MausDB: An open source application for phenotype data and mouse colony management in large-scale mouse phenotyping projects
Background: Large-scale, comprehensive and standardized high-throughput mouse phenotyping has been established as a tool of functional genome research by the German Mouse Clinic a...
Holger Maier, Christoph Lengger, Bruno Simic, Helm...
ESWS
2008
Springer
15 years 1 months ago
Querying Distributed RDF Data Sources with SPARQL
Integrated access to multiple distributed and autonomous RDF data sources is a key challenge for many semantic web applications. As a reaction to this challenge, SPARQL, the W3C Re...
Bastian Quilitz, Ulf Leser
BMCBI
2010
146views more  BMCBI 2010»
14 years 12 months ago
Booly: a new data integration platform
Background: Data integration is an escalating problem in bioinformatics. We have developed a web tool and warehousing system, Booly, that features a simple yet flexible data model...
Long H. Do, Francisco F. Esteves, Harvey J. Karten...
BMCBI
2011
14 years 6 months ago
Worm Phenotype Ontology: integrating phenotype data within and beyond the C. elegans community
Background: Caenorhabditis elegans gene-based phenotype information dates back to the 1970’s, beginning with Sydney Brenner and the characterization of behavioral and morphologi...
Gary Schindelman, Jolene Fernandes, Carol Bastiani...