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» Technologies for Integrating Biological Data
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NAR
2008
223views more  NAR 2008»
14 years 11 months ago
AtPID: Arabidopsis thaliana protein interactome database - an integrative platform for plant systems biology
Arabidopsis thaliana Protein Interactome Database (AtPID) is an object database that integrates data from several bioinformatics prediction methods and manually collected informat...
Jian Cui, Peng Li, Guang Li, Feng Xu, Chen Zhao, Y...
NAR
2008
142views more  NAR 2008»
14 years 11 months ago
CMGSDB: integrating heterogeneous Caenorhabditis elegans data sources using compositional data mining
CMGSDB (Database for Computational Modeling of Gene Silencing) is an integration of heterogeneous data sources about Caenorhabditis elegans with capabilities for compositional dat...
Amrita Pati, Ying Jin, Karsten Klage, Richard F. H...
JAMIA
2010
91views more  JAMIA 2010»
14 years 6 months ago
Serving the enterprise and beyond with informatics for integrating biology and the bedside (i2b2)
Informatics for Integrating Biology and the Bedside (i2b2) is one of seven projects sponsored by the NIH Roadmap National Centers for Biomedical Computing (http://www. ncbcs.org)....
Shawn N. Murphy, Griffin Weber, Michael Mendis, Vi...
BIBM
2007
IEEE
171views Bioinformatics» more  BIBM 2007»
15 years 6 months ago
GenMiner: Mining Informative Association Rules from Genomic Data
GENMINER is a smart adaptation of closed itemsets based association rules extraction to genomic data. It takes advantage of the novel NORDI discretization method and of the CLOSE ...
Ricardo Martínez, Claude Pasquier, Nicolas ...
BIBE
2005
IEEE
15 years 5 months ago
Using Data Mining Techniques to Learn Layouts of Flat-File Biological Datasets
One of the major problems in biological data integration is that many data sources are stored as flat-files, with a variety of different layouts. Integrating data from such sour...
Kaushik Sinha, Xuan Zhang, Ruoming Jin, Gagan Agra...