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» Technologies for Integrating Biological Data
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JMLR
2010
145views more  JMLR 2010»
14 years 6 months ago
Event based text mining for integrated network construction
The scientific literature is a rich and challenging data source for research in systems biology, providing numerous interactions between biological entities. Text mining technique...
Yvan Saeys, Sofie Van Landeghem, Yves Van de Peer
BMCBI
2008
83views more  BMCBI 2008»
14 years 12 months ago
Integrative bioinformatics analysis of transcriptional regulatory programs in breast cancer cells
Background: Microarray technology has unveiled transcriptomic differences among tumors of various phenotypes, and, especially, brought great progress in molecular understanding of...
Atsushi Niida, Andrew D. Smith, Seiya Imoto, Shuic...
BMCBI
2006
137views more  BMCBI 2006»
14 years 11 months ago
INTEGRATOR: interactive graphical search of large protein interactomes over the Web
Background: The rapid growth of protein interactome data has elevated the necessity and importance of network analysis tools. However, unlike pure text data, network search spaces...
Aaron N. Chang, Jason McDermott, Zachary Frazier, ...
DILS
2006
Springer
15 years 3 months ago
A Method for Similarity-Based Grouping of Biological Data
Similarity-based grouping of data entries in one or more data sources is a task underlying many different data management tasks, such as, structuring search results, removal of red...
Vaida Jakoniene, David Rundqvist, Patrick Lambrix
VLDB
2004
ACM
143views Database» more  VLDB 2004»
15 years 5 months ago
GPX: Interactive Mining of Gene Expression Data
Discovering co-expressed genes and coherent expression patterns in gene expression data is an important data analysis task in bioinformatics research and biomedical applications. ...
Daxin Jiang, Jian Pei, Aidong Zhang