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» Technologies for Integrating Biological Data
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BMCBI
2008
105views more  BMCBI 2008»
14 years 12 months ago
SIGMA2: A system for the integrative genomic multi-dimensional analysis of cancer genomes, epigenomes, and transcriptomes
Background: High throughput microarray technologies have afforded the investigation of genomes, epigenomes, and transcriptomes at unprecedented resolution. However, software packa...
Raj Chari, Bradley P. Coe, Craig Wedseltoft, Marie...
BMCBI
2005
131views more  BMCBI 2005»
14 years 11 months ago
Critical evaluation of the JDO API for the persistence and portability requirements of complex biological databases
Background: Complex biological database systems have become key computational tools used daily by scientists and researchers. Many of these systems must be capable of executing on...
Marko Srdanovic, Ulf Schenk, Michael Schwieger, Fa...
DEXA
2007
Springer
150views Database» more  DEXA 2007»
15 years 6 months ago
Sequence Alignment as a Database Technology Challenge
Abstract. Sequence alignment is an important task for molecular biologists. Because alignment basically deals with approximate string matching on large biological sequence collecti...
Hans Philippi
LREC
2008
166views Education» more  LREC 2008»
15 years 1 months ago
KnoFusius: a New Knowledge Fusion System for Interpretation of Gene Expression Data
This paper introduces a new architecture that aims at combining molecular biology data with information automatically extracted from scientific literature (using text mining techn...
Pavel Smrz
ISBI
2002
IEEE
16 years 15 days ago
Virtual reality in biological microscopic imaging
Confocal microscopes have recently allowed biologists and biomedical researchers to obtain time dependent 3D data sets of biological objects, such as cells and tissues. Scientific...
Robert van Liere, Wim C. de Leeuw, Jurriaan D. Mul...