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BMCBI
2006
139views more  BMCBI 2006»
14 years 10 months ago
Improvement in accuracy of multiple sequence alignment using novel group-to-group sequence alignment algorithm with piecewise li
Background: Multiple sequence alignment (MSA) is a useful tool in bioinformatics. Although many MSA algorithms have been developed, there is still room for improvement in accuracy...
Shinsuke Yamada, Osamu Gotoh, Hayato Yamana
70
Voted
RECOMB
2002
Springer
15 years 10 months ago
Inferring Piecewise Ancestral History from Haploid Sequences
There has been considerable recent interest in the use of haplotype structure to aid in the design and analysis of case-control association studies searching for genetic predictors...
Russell Schwartz, Andrew G. Clark, Sorin Istrail
CORR
2004
Springer
177views Education» more  CORR 2004»
14 years 10 months ago
Typestate Checking and Regular Graph Constraints
We introduce regular graph constraints and explore their decidability properties. The motivation for regular graph constraints is 1) type checking of changing types of objects in ...
Viktor Kuncak, Martin C. Rinard
ICSM
2009
IEEE
15 years 5 months ago
Maintenance and agile development: Challenges, opportunities and future directions
Software entropy is a phenomenon where repeated changes gradually degrade the structure of the system, making it hard to understand and maintain. This phenomenon imposes challenge...
Geir Kjetil Hanssen, Aiko Fallas Yamashita, Reidar...
ICFP
2009
ACM
15 years 11 months ago
Identifying query incompatibilities with evolving XML schemas
During the life cycle of an XML application, both schemas and queries may change from one version to another. Schema evolutions may affect query results and potentially the validi...
Nabil Layaïda, Pierre Genevès, Vincent...