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126
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BMCBI
2010
189views more  BMCBI 2010»
15 years 26 days ago
High quality protein sequence alignment by combining structural profile prediction and profile alignment using SABERTOOTH
Background: Protein alignments are an essential tool for many bioinformatics analyses. While sequence alignments are accurate for proteins of high sequence similarity, they become...
Florian Teichert, Jonas Minning, Ugo Bastolla, Mar...
JUCS
2002
120views more  JUCS 2002»
15 years 12 days ago
Instance Cooperative Memory to Improve Query Expansion in Information Retrieval Systems
The main goal of this research is to improve Information Retrieval Systems by enabling them to generate search outcomes that are relevant and customized to each specific user. Our ...
Lobna Jeribi, Béatrice Rumpler
97
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EVOW
2006
Springer
15 years 4 months ago
Hierarchical Clustering, Languages and Cancer
In this paper, we introduce a novel objective function for the hierarchical clustering of data from distance matrices, a very relevant task in Bioinformatics. To test the robustnes...
Pritha Mahata, Wagner Costa, Carlos Cotta, Pablo M...
BMCBI
2006
171views more  BMCBI 2006»
15 years 24 days ago
The effect of oligonucleotide microarray data pre-processing on the analysis of patient-cohort studies
Background: Intensity values measured by Affymetrix microarrays have to be both normalized, to be able to compare different microarrays by removing non-biological variation, and s...
Roel G. W. Verhaak, Frank J. T. Staal, Peter J. M....
GLVLSI
2005
IEEE
99views VLSI» more  GLVLSI 2005»
15 years 6 months ago
An empirical study of crosstalk in VDSM technologies
We perform a detailed study of various crosstalk scenarios in VDSM technologies by using a distributed model of the crosstalk site and make a number of key observations about the ...
Shahin Nazarian, Massoud Pedram, Emre Tuncer