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CONSTRAINTS
2006
120views more  CONSTRAINTS 2006»
15 years 26 days ago
Constraint Models for the Covering Test Problem
Covering arrays can be applied to the testing of software, hardware and advanced materials, and to the effects of hormone interaction on gene expression. In this paper we develop c...
Brahim Hnich, Steven David Prestwich, Evgeny Selen...
96
Voted
BIBE
2005
IEEE
115views Bioinformatics» more  BIBE 2005»
15 years 6 months ago
GOMIT: A Generic and Adaptive Annotation Algorithm Based on Gene Ontology Term Distributions
We address the issue of providing highly informative annotations using information revealed by the structured vocabularies of Gene Ontology (GO). For a target, a set of candidate ...
In-Yee Lee, Jan-Ming Ho, Ming-Syan Chen
93
Voted
BIOCOMP
2006
15 years 2 months ago
The Generalized Topological Overlap Matrix for Detecting Modules in Gene Networks
Systems biologic studies of gene and protein interaction networks have found that these networks are comprised of `modules' (groups of tightly interconnected nodes). Module i...
Andy M. Yip, Steve Horvath
130
Voted
ICASSP
2011
IEEE
14 years 4 months ago
Uncover cooperative gene regulations by microRNAs and transcription factors in glioblastoma using a nonnegative hybrid factor mo
—Transcriptional regulation by transcription factors (TFs) and microRNAs controls when and how much RNA is created. Due to technical limitations, the protein level expressions of...
Jia Meng, Hung-I Harry Chen, Jianqiu Zhang, Yidong...
80
Voted
NIPS
2004
15 years 2 months ago
PAC-Bayes Learning of Conjunctions and Classification of Gene-Expression Data
We propose a "soft greedy" learning algorithm for building small conjunctions of simple threshold functions, called rays, defined on single real-valued attributes. We al...
Mario Marchand, Mohak Shah