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» Tests for gene clustering
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138
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BMCBI
2008
128views more  BMCBI 2008»
15 years 29 days ago
Nonparametric relevance-shifted multiple testing procedures for the analysis of high-dimensional multivariate data with small sa
Background: In many research areas it is necessary to find differences between treatment groups with several variables. For example, studies of microarray data seek to find a sign...
Cornelia Frömke, Ludwig A. Hothorn, Siegfried...
99
Voted
BMCBI
2007
172views more  BMCBI 2007»
15 years 29 days ago
msBayes: Pipeline for testing comparative phylogeographic histories using hierarchical approximate Bayesian computation
Background: Although testing for simultaneous divergence (vicariance) across different population-pairs that span the same barrier to gene flow is of central importance to evoluti...
Michael J. Hickerson, Eli Stahl, Naoki Takebayashi
94
Voted
PSB
2004
15 years 2 months ago
Modeling Cellular Processes with Variational Bayesian Cooperative Vector Quantizer
Gene expression of a cell is controlled by sophisticated cellular processes. The capability of inferring the states of these cellular processes would provide insight into the mech...
Xinghua Lu, Milos Hauskrecht, Roger S. Day
85
Voted
KDD
2004
ACM
103views Data Mining» more  KDD 2004»
16 years 1 months ago
An objective evaluation criterion for clustering
We propose and test an objective criterion for evaluation of clustering performance: How well does a clustering algorithm run on unlabeled data aid a classification algorithm? The...
Arindam Banerjee, John Langford
CMSB
2006
Springer
15 years 4 months ago
Randomization and Feedback Properties of Directed Graphs Inspired by Gene Networks
Having in mind the large-scale analysis of gene regulatory networks, we review a graph decimation algorithm, called "leaf-removal", which can be used to evaluate the feed...
M. Cosentino Lagomarsino, P. Jona, B. Bassetti