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» Tests for gene clustering
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107
Voted
NAR
2000
117views more  NAR 2000»
15 years 12 days ago
The TIGR Gene Indices: reconstruction and representation of expressed gene sequences
Expressed sequence tags (ESTs) have provided a first glimpse of the collection of transcribed sequences in a variety of organisms. However, a careful analysis of this sequence dat...
John Quackenbush, Feng Liang, Ingeborg Holt, Geo P...
102
Voted
KDD
2004
ACM
150views Data Mining» more  KDD 2004»
16 years 1 months ago
A framework for ontology-driven subspace clustering
Traditional clustering is a descriptive task that seeks to identify homogeneous groups of objects based on the values of their attributes. While domain knowledge is always the bes...
Jinze Liu, Wei Wang 0010, Jiong Yang
110
Voted
BMCBI
2010
132views more  BMCBI 2010»
15 years 22 days ago
Parallel multiplicity and error discovery rate (EDR) in microarray experiments
Background: In microarray gene expression profiling experiments, differentially expressed genes (DEGs) are detected from among tens of thousands of genes on an array using statist...
Wayne Wenzhong Xu, Clay J. Carter
104
Voted
CSB
2005
IEEE
143views Bioinformatics» more  CSB 2005»
15 years 6 months ago
Multivariate gene selection: Does it help
When building predictors of disease state based on gene expression data, gene selection is performed in order to achieve a good performance and to identify a relevant subset of ge...
Carmen Lai, Marcel J. T. Reinders
113
Voted
BMCBI
2008
103views more  BMCBI 2008»
15 years 22 days ago
Discovering multi-level structures in bio-molecular data through the Bernstein inequality
Background: The unsupervised discovery of structures (i.e. clusterings) underlying data is a central issue in several branches of bioinformatics. Methods based on the concept of s...
Alberto Bertoni, Giorgio Valentini