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» Tests for gene clustering
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120
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BMCBI
2002
136views more  BMCBI 2002»
15 years 15 days ago
Making sense of EST sequences by CLOBBing them
Background: Expressed sequence tags (ESTs) are single pass reads from randomly selected cDNA clones. They provide a highly cost-effective method to access and identify expressed g...
John Parkinson, David B. Guiliano, Mark L. Blaxter
87
Voted
ICTIR
2009
Springer
15 years 7 months ago
A New Measure of the Cluster Hypothesis
Abstract. We have found that the nearest neighbor (NN) test is an insufficient measure of the cluster hypothesis. The NN test is a local measure of the cluster hypothesis. Designer...
Mark D. Smucker, James Allan
168
Voted
BMCBI
2006
202views more  BMCBI 2006»
15 years 22 days ago
Integrated biclustering of heterogeneous genome-wide datasets for the inference of global regulatory networks
Background: The learning of global genetic regulatory networks from expression data is a severely under-constrained problem that is aided by reducing the dimensionality of the sea...
David J. Reiss, Nitin S. Baliga, Richard Bonneau
BMCBI
2006
98views more  BMCBI 2006»
15 years 22 days ago
In search of functional association from time-series microarray data based on the change trend and level of gene expression
Background: The increasing availability of time-series expression data opens up new possibilities to study functional linkages of genes. Present methods used to infer functional l...
Feng He, An-Ping Zeng
124
Voted
BMCBI
2006
170views more  BMCBI 2006»
15 years 22 days ago
Biclustering of gene expression data by non-smooth non-negative matrix factorization
Background: The extended use of microarray technologies has enabled the generation and accumulation of gene expression datasets that contain expression levels of thousands of gene...
Pedro Carmona-Saez, Roberto D. Pascual-Marqui, Fra...