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» Tests for gene clustering
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GECCO
2006
Springer
168views Optimization» more  GECCO 2006»
15 years 4 months ago
Crossover gene selection by spatial location
Spatial based gene selection for division of chromosomes used by crossover operators is proposed for three-dimensional problems. This spatial selection is shown to preserve more g...
David M. Cherba, William F. Punch
ICML
2005
IEEE
16 years 1 months ago
Error bounds for correlation clustering
This paper presents a learning theoretical analysis of correlation clustering (Bansal et al., 2002). In particular, we give bounds on the error with which correlation clustering r...
Thorsten Joachims, John E. Hopcroft
102
Voted
BMCBI
2007
131views more  BMCBI 2007»
15 years 25 days ago
FUNC: a package for detecting significant associations between gene sets and ontological annotations
Background: Genome-wide expression, sequence and association studies typically yield large sets of gene candidates, which must then be further analysed and interpreted. Informatio...
Kay Prüfer, Bjoern Muetzel, Hong Hai Do, Gunt...
BIBE
2003
IEEE
121views Bioinformatics» more  BIBE 2003»
15 years 6 months ago
Time Series Analysis of Gene Expression and Location Data
We develop a method for integrating time series expression profiles and factor-gene binding data to quantify dynamic aspects of gene regulation. We estimate latencies for transcr...
Chen-Hsiang Yeang, Tommi Jaakkola
133
Voted
BMCBI
2008
118views more  BMCBI 2008»
15 years 25 days ago
PseudoGeneQuest - Service for identification of different pseudogene types in the human genome
Background: Pseudogenes, nonfunctional copies of genes, evolve fast due the lack of evolutionary pressures and thus appear in several different forms. PseudoGeneQuest is an online...
Csaba P. Ortutay, Mauno Vihinen