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IPPS
2009
IEEE
15 years 6 months ago
Accelerating error correction in high-throughput short-read DNA sequencing data with CUDA
Emerging DNA sequencing technologies open up exciting new opportunities for genome sequencing by generating read data with a massive throughput. However, produced reads are signif...
Haixiang Shi, Bertil Schmidt, Weiguo Liu, Wolfgang...
ICPADS
2006
IEEE
15 years 5 months ago
Acceleration of Maximum Likelihood Estimation for Tomosynthesis Mammography
Maximum likelihood (ML) estimation is used during tomosynthesis mammography reconstruction. A single reconstruction involves the processing of highresolution projection images, wh...
Juemin Zhang, Waleed Meleis, David R. Kaeli, Tao W...
INFOSCALE
2006
ACM
15 years 5 months ago
Scalable hardware accelerator for comparing DNA and protein sequences
Abstract— Comparing genetic sequences is a well-known problem in bioinformatics. Newly determined sequences are being compared to known sequences stored in databases in order to ...
Philippe Faes, Bram Minnaert, Mark Christiaens, Er...
ASPLOS
2010
ACM
15 years 3 months ago
Accelerating MATLAB Image Processing Toolbox functions on GPUs
In this paper, we present our effort in developing an opensource GPU (graphics processing units) code library for the MATLAB Image Processing Toolbox (IPT). We ported a dozen of r...
Jingfei Kong, Martin Dimitrov, Yi Yang, Janaka Liy...
VISSYM
2007
15 years 1 months ago
Multiresolution MIP Rendering of Large Volumetric Data Accelerated on Graphics Hardware
This paper is concerned with a multiresolution representation for maximum intensity projection (MIP) volume rendering based on morphological pyramids which allows progressive refi...
Wladimir J. van der Laan, Andrei Jalba, Jos B. T. ...