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» The Case for Grounding Databases
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ESE
2006
105views Database» more  ESE 2006»
15 years 1 months ago
Replaying development history to assess the effectiveness of change propagation tools
As developers modify software entities such as functions or variables to introduce new features, enhance old ones, or fix bugs, they must ensure that other entities in the software...
Ahmed E. Hassan, Richard C. Holt
JISE
2008
77views more  JISE 2008»
15 years 1 months ago
Formalized Entity Extraction Methodology for Changeable Business Requirements
business requirement in the real world cannot be abstracted correctly into an entity-relationship schema. Once core entities are discovered, we can obtain an Entity-Relationship Di...
Namgyu Kim, Sangwon Lee, Songchun Moon
TCBB
2008
95views more  TCBB 2008»
15 years 1 months ago
Solving the Problem of Trans-Genomic Query with Alignment Tables
Abstract-- The trans-genomic query (TGQ) problem -- enabling the free query of biological information, even across genomes -- is a central challenge facing bioinformatics. Solution...
Douglas Stott Parker Jr., Ruey-Lung Hsiao, Yi Xing...
BMCBI
2005
124views more  BMCBI 2005»
15 years 1 months ago
Probabilistic annotation of protein sequences based on functional classifications
: One of the most evident achievements of bioinformatics is the development of methods that transfer biological knowledge from characterised proteins to uncharacterised sequences. ...
Emmanuel D. Levy, Christos A. Ouzounis, Walter R. ...
BMCBI
2005
97views more  BMCBI 2005»
15 years 1 months ago
Comparative mapping of sequence-based and structure-based protein domains
Background: Protein domains have long been an ill-defined concept in biology. They are generally described as autonomous folding units with evolutionary and functional independenc...
Ya Zhang, John-Marc Chandonia, Chris H. Q. Ding, S...