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124
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CPM
2005
Springer
109views Combinatorics» more  CPM 2005»
15 years 3 months ago
Using PQ Trees for Comparative Genomics
Permutations on strings representing gene clusters on genomes have been studied earlier in [18, 14, 3, 12, 17] and the idea of a maximal permutation pattern was introduced in [12]....
Gad M. Landau, Laxmi Parida, Oren Weimann
81
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GECCO
2003
Springer
165views Optimization» more  GECCO 2003»
15 years 3 months ago
An Evolutionary Approach for Molecular Docking
We have developed an evolutionary approach for the flexible docking that is now an important component of a rational drug design. This automatic docking tool, referred to as the G...
Jinn-Moon Yang
118
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BMCBI
2006
161views more  BMCBI 2006»
14 years 10 months ago
A method for rapid similarity analysis of RNA secondary structures
Background: Owing to the rapid expansion of RNA structure databases in recent years, efficient methods for structure comparison are in demand for function prediction and evolution...
Na Liu, Tianming Wang
96
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ISMB
2003
14 years 11 months ago
Deriving phylogenetic trees from the similarity analysis of metabolic pathways
Comparative analysis of metabolic pathways in different genomes can give insights into the understanding of evolutionary and organizational relationships among species. This type ...
Maureen Heymans, Ambuj K. Singh
77
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EVOW
2008
Springer
14 years 12 months ago
Improving Metaheuristic Performance by Evolving a Variable Fitness Function
In this paper we study a complex real world workforce scheduling problem. We apply constructive search and variable neighbourhood search (VNS) metaheuristics and enhance these meth...
Keshav P. Dahal, Stephen Remde, Peter I. Cowling, ...