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BMCBI
2010
153views more  BMCBI 2010»
15 years 3 months ago
VITCOMIC: visualization tool for taxonomic compositions of microbial communities based on 16S rRNA gene sequences
Background: Understanding the community structure of microbes is typically accomplished by sequencing 16S ribosomal RNA (16S rRNA) genes. These community data can be represented b...
Hiroshi Mori, Fumito Maruyama, Ken Kurokawa
ISCAPDCS
2003
15 years 4 months ago
Design and Analysis of Improved Shortest Path Tree Update for Network Routing
The quick construction of the Shortest Path Tree (SPT) is essential to achieve fast routing speed for an interior network using link state protocols, such as OSPF and IS-IS. Whene...
Bin Xiao, Qingfeng Zhuge, Zili Shao, Edwin Hsing-M...
CPM
2006
Springer
125views Combinatorics» more  CPM 2006»
15 years 6 months ago
Geometric Suffix Tree: A New Index Structure for Protein 3-D Structures
Abstract. Protein structure analysis is one of the most important research issues in the post-genomic era, and faster and more accurate query data structures for such 3-D structure...
Tetsuo Shibuya
ACL
1998
15 years 4 months ago
Restrictions on Tree Adjoining Languages
Several methods are known for parsing languages generated by Tree Adjoining Grammars (TAGs) in O(n 6) worst case running time. In this paper we investigate which restrictions on T...
Giorgio Satta, William Schuler
JMM2
2008
124views more  JMM2 2008»
15 years 2 months ago
Integrated Feature Selection and Clustering for Taxonomic Problems within Fish Species Complexes
As computer and database technologies advance rapidly, biologists all over the world can share biologically meaningful data from images of specimens and use the data to classify th...
Huimin Chen, Henry L. Bart Jr., Shuqing Huang