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» The Context-Dependence of Amino Acid Properties
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ICMENS
2003
IEEE
80views Hardware» more  ICMENS 2003»
15 years 7 months ago
Molecular Dynamics Calculations of the Electrostatic Properties of Tubulin and Their Consequences for Microtubules
crystallographic results were made available through the Protein Data Bank (PDB) (entries: ITUB and IJFF) which allowed us to view the 3D atomic resolution structure oftubulin. (se...
J. A. Tuszynski, E. J. Carpenter, E. Crawford, J. ...
ICIP
2002
IEEE
16 years 3 months ago
Retrieval of 3D protein structures
A protein molecule is made of a long chain of amino acid sequences that fold into a complex three-dimensional structure. It is often the geometrical shapes that determine the prot...
Shann-Ching Chen, Tsuhan Chen
136
Voted
ICAISC
2010
Springer
15 years 3 months ago
Computer Assisted Peptide Design and Optimization with Topology Preserving Neural Networks
Abstract. We propose a non-standard neural network called TPNN which offers the direct mapping from a peptide sequence to a property of interest in order to model the quantitative ...
Jörg D. Wichard, Sebastian Bandholtz, Carsten...
115
Voted
BMCBI
2006
102views more  BMCBI 2006»
15 years 1 months ago
Prediction of protein structural class with Rough Sets
Background: A new method for the prediction of protein structural classes is constructed based on Rough Sets algorithm, which is a rule-based data mining method. Amino acid compos...
Youfang Cao, Shi Liu, Lida Zhang, Jie Qin, Jiang W...
ISMB
1994
15 years 3 months ago
Predicting Location and Structure Of beta-Sheet Regions Using Stochastic Tree Grammars
We describe and demonstrate the effectiveness of a method of predicting protein secondary structures, sheet regions in particular, using a class of stochastic tree grammars as rep...
Hiroshi Mamitsuka, Naoki Abe