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CASES
2008
ACM
13 years 8 months ago
Efficient vectorization of SIMD programs with non-aligned and irregular data access hardware
Automatic vectorization of programs for partitioned-ALU SIMD (Single Instruction Multiple Data) processors has been difficult because of not only data dependency issues but also n...
Hoseok Chang, Wonyong Sung
SPAA
2010
ACM
13 years 6 months ago
On the bit communication complexity of randomized rumor spreading
We study the communication complexity of rumor spreading in the random phone-call model. Suppose n players communicate in parallel rounds, where in each round every player calls a...
Pierre Fraigniaud, George Giakkoupis
BMCBI
2007
146views more  BMCBI 2007»
13 years 6 months ago
Bayesian hierarchical model for transcriptional module discovery by jointly modeling gene expression and ChIP-chip data
Background: Transcriptional modules (TM) consist of groups of co-regulated genes and transcription factors (TF) regulating their expression. Two high-throughput (HT) experimental ...
Xiangdong Liu, Walter J. Jessen, Siva Sivaganesan,...
BMCBI
2008
101views more  BMCBI 2008»
13 years 6 months ago
Term-tissue specific models for prediction of gene ontology biological processes using transcriptional profiles of aging in dros
Background: Predictive classification on the base of gene expression profiles appeared recently as an attractive strategy for identifying the biological functions of genes. Gene O...
Wensheng Zhang, Sige Zou, Jiuzhou Song
BMCBI
2006
128views more  BMCBI 2006»
13 years 6 months ago
Rank-statistics based enrichment-site prediction algorithm developed for chromatin immunoprecipitation on chip experiments
Background: High density oligonucleotide tiling arrays are an effective and powerful platform for conducting unbiased genome-wide studies. The ab initio probe selection method emp...
Srinka Ghosh, Heather A. Hirsch, Edward A. Sekinge...